polymorphism | genotypes | genotype sample size | group sizes [control,PTSD]4 | minor allele frequency | HWE Χ2 | p-value | include genotypes |
---|---|---|---|---|---|---|---|
rs9903602 | GG; GT; TT | 6, 9, 27 | 2,4; 3,6; 12,15 | .178 | 7.7 | .005 | exclude |
rs9896947 | CC, CT, TT | 28, 14, 0 | 13,15; 7,7; 0,0 | .833 | 1.68 | .20 | CC,CT |
rs9303628 | AA; AG;GG | 6, 16, 20 | 3,3; 10,6; 7,13 | .333 | .86 | .35 | AG, GG |
rs7212502 | AA; AG; GG | 38, 4, 0 | 20,18; 2,2; 0,0 | .952 | .105 | .75 | exclude |
rs4583306 | AA; AG; GG | 17, 18, 7 | 10,7; 7,11; 3,4 | .619 | .350 | .55 | AA, AG |
rs4251417 | CC; CT; TT | 36, 6, 0 | 18,18; 2,4; 0,0 | .929 | .25 | .68 | exclude |
rs3813034 | AA; AC; CC | 14, 16, 12 | 9,5; 7,9; 4,8 | .274 | 2.34 | .13 | exclude |
rs2020936 | AA, AG, GG | 23, 17, 2 | 9,14; 10,7; 1,1 | .750 | .265 | .61 | AA, AG |
rs16965628 3 | CC; CG; GG | 0, 15, 27 | 0,0; 8,7; 13,14 | .179 | 1.98 | .18 | CG, GG |
rs16965623 | AA; AG; GG | 37, 5, 0 | 18,19; 2,3; 0,0 | .940 | .170 | .68 | exclude |
rs140701 3 | CC; CT; TT | 11, 21, 10 | 7,4; 8,13; 5,6 | .512 | .000 | .99 | CT, TT |
rs12150214 | CC; CG; GG | 3, 17, 22 | 1,2; 11,16; 8,14 | .274 | .013 | .91 | CG, GG |
rs11080122 | CC; CT; TT | 26, 16, 0 | 10,16; 10,6; 0,0 | .810 | 2.33 | .13 | CC, CT |
triallelic 5-LTTLPR 3 | SS,SLG,LGLG; SLA,LGLA; LALA | 15, 18, 9 | 10,5; 6,12; 6;3 | .571 | .656 | .42 | SS,SLG,LGLG; SLA,LGLA; |
biallelic 5-HTTLPR 3 | SS; SL; LL | 10, 20, 12 | 3,7; 12,8; 5,7 | .476 | .087 | .77 | S carriers, LL |