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Table 2 GRM3 haplotype data

From: No evidence for association between polymorphisms in GRM3and schizophrenia

SNP

Study

Haplotype

rs187993

 

2

    

rs13242038

 

1

1

  

1

rs917071

 

1

1

1

 

1

rs6465084

  

1

1

1

1

rs1468412

   

1

1

1

rs7804100

    

1

1

Global P valuea

Egan et al 2004

0.23

0.05

0.01

0.01

0.01

 

Cardiff

0.52

0.80

0.79

0.88

0.82

Best p value b

Egan et al 2004

0.01

0.01

0.01

0.00

0.00

 

Cardiff

0.09

0.58

0.60

0.60

0.98

Frequencyc

Egan et al 2004

0.29

0.57

0.62

0.61

0.53

 

Cardiff cases

0.29

0.62

0.66

0.64

0.58

 

Cardiff controls

0.32

0.63

0.67

0.65

0.58

  1. Comparison of haplotypes for Cardiff case-control sample and Egan et al., [6] Caucasian sample. a global p-value, b best p-value in Egan et al., [6] compared with same haplotype in Cardiff sample, c Frequency of significant haplotype. In the Cardiff analysis, the no. of controls from 623 to 693 and the no. of cases ranges from 582 to 652.